Chromatin State15 (dense track) Track Settings
 
Chromatin state calculated by ChromHMM   (All Expression and Regulation tracks)

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 Adipose adult  Adipose adult   schema 
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 Cerebellum adult  Cerebellum adult   schema 
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 Cerebral cortex adult  Cerebral cortex adult   schema 
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 Hypothalamus adult  Hypothalamus adult   schema 
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 Liver adult  Liver adult   schema 
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 Lung adult  Lung adult   schema 
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 Rumen epithelial primary cells 2weeks  Rumen_epithelial_primary_cells_2weeks   schema 
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 Skeletal muscle adult  Skeletal muscle adult   schema 
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 Spleen adult  Spleen adult   schema 
    

Description

This track displays the predicted chromatin states across different tissues.

Display Conventions and Configuration

The colours used for each of the chromatin states are as follows

State DESCRIPTION COLOR COLOR CODE
1 Open chromatin 205,140,149
2 Active element 255,212,128
3 Active TSS 255,48,48
4 Active promoter 255,215,0
5 Inactive/Weak Poised Promoter 255,248,250
6 Primed Enhancer 224,102,255
7 Active Enhancer 148,0,211
8 Weak Enhancer 255,250,255
9 Poised TSS/Promoter 238,44,44
10 PolyComb Repressed 209,238,238
11 Weak Repressed PolyComb 245,255,250
12 Poised Enhancer 238,210,238
13 Poised Enhancer 250,250,250
14 Insulter/Weak Primed Enhancer 119,136,153
15 Insulter 125,136,153